Development in waste water treatment research and processes : role of environmental microbiology in industrial wastewater research / edited by Maulin P. Shah, Nidhi Shah.
Intro -- Development in Waste Water Treatment Research and Processes -- Copyright -- Contents -- Contributors -- Chapter 1: Omics approaches for characterization of environmental microorganisms -- 1. Introduction -- 2. Role of bioinformatics in characterization of microbial communities -- 3. Genomics -- 4. Proteomics -- 5. Transcriptomics -- 6. Metabolomics -- 7. Fluxomics -- 8. Conclusion -- References -- Chapter 2: Environmental clean-up using metagenomics: From genomics to microbial bioremediation of contaminants -- 1. Introduction -- 2. Conventional gene sequencing technologies
2.1. Polymerase chain reaction -- 2.2. 16S rRNS gene sequencing -- 2.3. Fluorescence in situ hybridization -- 2.4. Microbial community profiling -- 2.4.1. Amplified ribosomal DNA restriction analysis -- 2.4.2. Ribosomal intergenic spacer analysis -- 2.4.3. Denaturing gradient gel electrophoresis (DGGE)/temperature gradient Gel electrophoresis (TGGE) -- 2.4.4. Terminal-restriction fragment length polymorphism -- 2.4.5. Randomly amplified polymorphic DNA (RAPD) analysis -- 2.4.6. DNA microarrays -- 3. Next Gen sequencing (NGS) -- 3.1. Three generations of NGS technology -- 4. Metagenomics
5. Metagenomic bioremediation of water contaminations -- 6. Metagenome screening methods -- 7. FACS stands for fluorescence-activated cell sorting -- 8. Advanced sequencing methods -- 8.1. Shotgun sequencing -- 8.2. Transcriptomics -- 8.3. Proteomics -- 9. Application of metagenomics -- 9.1. Application of metagenomics to biological wastewater treatment -- 9.1.1. Metagenomics expands the understanding of biological phosphorus removal process -- 9.1.2. Metagenomics advances our knowledge of nitrogen cycling microorganisms for nitrogen removal
9.1.3. Using metagenomics to study antibiotic resistance genes in wastewater treatment systems -- 10. Conclusion and future prospective -- References -- Chapter 3: Microbial communities for degradation of polycyclic aromatic hydrocarbons -- 1. Introduction -- 2. Bacteria -- 3. Fungi -- 4. Algae -- 5. Conclusion and future perspectives -- Acknowledgment -- References -- Chapter 4: Prospects of bacteria-plant association for the sustainable agriculture and mitigation of organic and in -- 1. Introduction -- 2. Environmental pollutants and their toxicity -- 3. Environmental remediation methods
3.1. Physicochemical approach -- 3.1.1. Incineration -- 3.1.2. Advanced oxidation processes (AOPs) -- 3.1.3. Chemical reduction/oxidation approach -- 3.2. Biological approach -- 3.2.1. Bioremediation -- 3.2.2. Phytoremediation -- 4. Plant-microbe interaction for sustainable agricultural development and environmental clean up -- 4.1. Plant growth-promoting rhizobacteria -- 4.2. Endophytes -- 4.3. Mycorrhiza -- 5. Role of genetically engineered microorganisms in environmental remediation -- 6. Prospects and challenges -- 7. Conclusion -- References
